@aipoch-ai

crispr-grna-designer generates optimized crispr guide rna sequences with on-target efficiency scoring and off-target prediction for cas9 variants. supports batch processing across multiple genomes and exon-level targeting with configurable pam motifs and gc constraints.

go-kegg-enrichment performs gene ontology and kegg pathway analysis on gene lists with statistical testing and visualization. supports multiple organisms and id types, generates automated biological interpretation summaries.

survival-analysis-km generates kaplan-meier curves and cox regression results from time-to-event data. covers log-rank tests, hazard ratios, and summary statistics for clinical datasets with multi-group stratification.

peer-review-response-drafter helps researchers draft structured responses to journal reviewer comments with templated examples, tone adjustment options, and point-by-point addressing. intended for academic manuscript revisions.

generates nih 2023-compliant data management and sharing plan drafts with fair principle alignment. covers six required policy elements including data types, standards, preservation timelines, and access procedures. primarily command-line driven with optional interactive mode.

low-resource-ai-researcher wraps parameter-efficient fine-tuning (lora, qlora) for medical llms on consumer gpus. provides configuration templates, dataset references, and training examples but lacks concrete decision logic and failure handling details.

journal-matchmaker analyzes paper abstracts to recommend submission venues using tf-idf matching against a local journal database. it filters by impact factor and research field but lacks clarity on matching quality or failure recovery.

digital-twin-patient-builder integrates genotype, clinical history, and imaging data to simulate drug efficacy and toxicity predictions via pharmacokinetic modeling, but lacks actionable procedures and explicit failure handling.

comparison-table-gen produces markdown and html tables from comma-separated item and attribute lists. scope limited to two-dimensional comparisons without demonstrated handling of complex medical data semantics or validation.

conference-abstract-adaptor reformats research abstracts to match word limits and structural requirements for five life sciences conferences. supports asgct, asco, sfn, aacr, and asm with automatic section extraction and compliance verification.

cover-letter-drafter generates customized cover letters for academic and medical contexts via command-line parameters, but lacks concrete procedural steps, failure mode documentation, and specific trigger conditions for integration.

cnv-caller-plotter detects copy number variations from whole genome sequencing and generates genome-wide visualizations. documentation is extensive but lacks actionable procedural steps, error handling, and concrete trigger phrases for actual invocation.

Query and annotate gene variants from ClinVar and dbSNP databases. Trigger when: - User provides a variant identifier (rsID, HGVS notation, genomic coordinat...

Draft Diversity, Equity, and Inclusion statements for academic applications

Uses analogies to explain complex medical concepts in accessible terms.

Use when identifying collaboration opportunities across fields, finding experts in complementary disciplines, translating methodologies between scientific do...

Analyze data with `survival-curve-risk-table` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Batch anonymize DICOM medical images by removing patient sensitive information (name, ID, birth date) while preserving image data for research use. Trigger w...

A medical assistant tool that transforms complex biochemical laboratory test results into clear, patient-friendly explanations with safety disclaimers and se...